Data Prep & Visualisation: Cleaning, Encoding, Features

Data cleaning and preparation process with graphs encoding and feature engineering on screen

Unlock the Power of Your Data with Professional Cleaning, Smart Feature Engineering, and Insightful Visualisations.

Table of Contents

  1. Introduction

  2. Why Data Cleaning and Preparation Matter

  3. Step-by-Step Data Cleaning Process

  4. Feature Engineering Explained

  5. Encoding Categorical Variables

  6. Data Visualisation Techniques

  7. Best Libraries for Data Cleaning and Visualisation

  8. Expert Insights and Industry Practices

  9. Conclusion

  10. Disclaimer

Introduction

In today’s data-driven world, cleaning, preparing, and visualising data is the backbone of any successful data science or machine learning project. Whether you're building a predictive model or an interactive dashboard, properly structured and cleaned data determines the accuracy and effectiveness of your outcomes.

In this post, we’ll explore the full lifecycle of data preparation, including feature engineering, missing value treatment, and encoding techniques, along with visualisation best practices to help you understand patterns and gain insights from your data.

Why Data Cleaning and Preparation Matter

Garbage in, garbage out – this saying is especially true in data science. Even the most advanced algorithms fail if the data they consume is noisy or incomplete.

Reasons to Clean and Prepare Data:

  • Improve model performance

  • Enhance data quality and reliability

  • Reduce bias and noise

  • Increase interpretability and accuracy

importance of data cleaningwhy prepare datadata preprocessing in machine learningbenefits of feature engineeringhow to clean data professionally

Step-by-Step Data Cleaning Process

Before moving to model-building, ensure your data is clean, consistent, and complete.

Handling Missing Values

Handling missing values is often the first step in cleaning raw datasets.

🔹 Techniques:

  • Deletion: Remove rows or columns with excessive missing values.

  • Imputation: Fill missing data using:

    • Mean/Median for numerical data

    • Mode for categorical data

    • Predictive modelling (e.g., kNN)

# Example: Filling missing values in Pandas
df['Age'].fillna(df['Age'].median(), inplace=True)

Outlier Detection and Treatment

Outliers can distort statistical measures. Detect them using:

  • Z-score method

  • IQR method

  • Visual inspection via box plots

# IQR method in Python
Q1 = df['Price'].quantile(0.25)
Q3 = df['Price'].quantile(0.75)
IQR = Q3 - Q1
df = df[~((df['Price'] < (Q1 - 1.5 * IQR)) | (df['Price'] > (Q3 + 1.5 * IQR)))]

Feature Engineering Explained

Feature engineering helps improve machine learning performance by enhancing data representation.

Creating New Features

Examples:

  • Combine features (e.g., BMI = weight/height²)

  • Extract date parts: year, month, weekday

  • Use domain knowledge to define new variables

# Creating a new feature
df['AgeGroup'] = pd.cut(df['Age'], bins=[0, 18, 35, 60, 100], labels=['Child', 'Young Adult', 'Adult', 'Senior'])

Normalisation and Scaling

Essential for distance-based models like KNN or SVM.

🔹 Techniques:

  • Min-Max Scaling

  • Standardisation (Z-score)

from sklearn.preprocessing import StandardScaler

scaler = StandardScaler()
df[['Salary', 'Age']] = scaler.fit_transform(df[['Salary', 'Age']])

Encoding Categorical Variables

Models only work with numbers. Encoding categorical variables is crucial.

One-Hot Encoding

Best for nominal (unordered) categories.

# Using pandas get_dummies
df = pd.get_dummies(df, columns=['Gender', 'City'], drop_first=True)

Label Encoding

Best for ordinal (ordered) categories.

from sklearn.preprocessing import LabelEncoder

le = LabelEncoder()
df['Education_Level'] = le.fit_transform(df['Education_Level'])

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Data Visualisation Techniques

Data visualisation is essential to understand relationships, spot trends, and communicate insights.

Common Tools:

  • Matplotlib: Basic static plots

  • Seaborn: Aesthetic statistical visualisations

  • Plotly: Interactive charts

import seaborn as sns
sns.boxplot(x='Gender', y='Salary', data=df)

Visualise Missing Data

import missingno as msno
msno.matrix(df)

Best Libraries for Data Cleaning and Visualisation

Purpose Library Description
Data Cleaning pandas Data manipulation
Missing Data Visualisation missingno Easy inspection of null values
Outlier Detection scipy, numpy Mathematical operations
Encoding scikit-learn Label & one-hot encoding
Visualisation seaborn, matplotlib, plotly Static and interactive plots

Expert Insights and Industry Practices

🔍 What the Experts Say:

  • Andrew Ng, Co-founder of Coursera and Adjunct Professor at Stanford:
    "More than 80% of machine learning is actually data cleaning and preparation. It’s the unsung hero of good AI systems."

  • Cassie Kozyrkov, Chief Decision Scientist at Google:
    "Your machine learning model is only as good as the data you feed it. Garbage data leads to garbage decisions."

✅ Industry Use-Cases:

  • Healthcare: Creating risk scores from raw vitals using domain-specific feature engineering.

  • Retail: Predictive pricing models based on encoded product categories and time-based features.

  • Finance: Visualising fraud patterns using PCA and data transformation.

Conclusion

Mastering data cleaning, preparation, and visualisation is not a choice—it's a necessity for anyone working with data. With proper techniques such as feature engineering, encoding, and visualisation, you can drastically improve the performance and interpretability of your machine learning models.

Take the time to understand your dataset, transform it thoughtfully, and visualise it clearly. These steps empower your models to perform better and help stakeholders understand the value of your work.

Disclaimer

While I am not a certified machine learning engineer or data scientist, I have thoroughly researched this topic using trusted academic sources, official documentation, expert insights, and widely accepted industry practices to compile this guide. This post is intended to support your learning journey by offering helpful explanations and practical examples. However, for high-stakes projects or professional deployment scenarios, consulting experienced ML professionals or domain experts is strongly recommended.
Your suggestions and views on machine learning are welcome—please share them below!

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